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1

[Methods in Molecular Biology] Mitochondrial Gene Expression Volume 2192 (Methods and Protocols) ||

Minczuk, Michal, Rorbach, Joanna

Year:

2021

File:

PDF, 7.96 MB

2021

2

Heterozygous SSBP1 start loss mutation co-segregates with hearing loss and the m.1555A>G mtDNA variant in a large multigenerational family

Kullar, Peter J, Gomez-Duran, Aurora, Gammage, Payam A, Garone, Caterina, Minczuk, Michal, Golder, Zoe, Wilson, Janet, Montoya, Julio, Häkli, Sanna, Kärppä, Mikko, Horvath, Rita, Majamaa, Kari, Chinne

Journal:

Year:

2018

Language:

english

File:

PDF, 892 KB

english, 2018

3

Mechanisms of Mitochondrial DNA Deletion Formation

Nissanka, Nadee, Minczuk, Michal, Moraes, Carlos T.

Journal:

Trends in Genetics

Year:

2019

File:

PDF, 1.27 MB

2019

4

Overexpressed yeast mitochondrial putative RNA helicase Mss116 partially restores proper mtRNA metabolism in strains lacking the Suv3 mtRNA helicase

Michal Minczuk, Aleksandra Dmochowska, Malgorzata Palczewska, Piotr P. Stepien

Journal:

Year:

2002

Language:

english

File:

PDF, 352 KB

english, 2002

5

The yeast nuclear geneDSS1, which codes for a putative RNase II, is necessary for the function of the mitochondrial degradosome in processing and turnover of RNA

A. Dziembowski, M. Malewicz, M. Minczuk, P. Golik, A. Dmochowska, P. P. Stepien

Journal:

Molecular Genetics and Genomics

Year:

1998

Language:

english

File:

PDF, 1022 KB

english, 1998

6

Human ATP-dependent RNA/DNA helicase hSuv3p interacts with the cofactor of survivin HBXIP

Michal Minczuk, Seweryn Mroczek, Sebastian D. Pawlak, Piotr P. Stepien

Journal:

Year:

2005

Language:

english

File:

PDF, 475 KB

english, 2005

7

Polyadenylation of mt mRNA: Identification of novel deadenylase of human mitochondria

Joanna Rorbach, Thomas Nicholls, Michal Minczuk

Journal:

Biochimica et Biophysica Acta (BBA) - Bioenergetics

Year:

2010

Language:

english

File:

PDF, 51 KB

english, 2010

8

The 5′ region of the human hSUV3 gene encoding mitochondrial DNA and RNA helicase: Promoter characterization and alternative pre-mRNA splicing

Michal Minczuk, Joanna Lilpop, Joanna Boros, Piotr P. Stepien

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression

Year:

2005

Language:

english

File:

PDF, 454 KB

english, 2005

9

Designer zinc-finger proteins and their applications

Monika Papworth, Paulina Kolasinska, Michal Minczuk

Journal:

Year:

2006

Language:

english

File:

PDF, 448 KB

english, 2006

10

Human Polynucleotide Phosphorylase, hPNPase, is Localized in Mitochondria

Jan Piwowarski, Pawel Grzechnik, Andrzej Dziembowski, Aleksandra Dmochowska, Michal Minczuk, Piotr P. Stepien

Journal:

Journal of Molecular Biology

Year:

2003

Language:

english

File:

PDF, 578 KB

english, 2003

11

Construction and testing of engineered zinc-finger proteins for sequence-specific modification of mtDNA

Minczuk, Michal, Kolasinska-Zwierz, Paulina, Murphy, Michael P, Papworth, Monika A

Journal:

Bioentrepreneur

Year:

2010

Language:

english

File:

PDF, 1.16 MB

english, 2010

12

The post-transcriptional life of mammalian mitochondrial RNA

Rorbach, Joanna, Minczuk, Michal

Journal:

Biochemical Journal

Year:

2012

Language:

english

File:

PDF, 848 KB

english, 2012

13

Mitochondria: Mitochondrial RNA metabolism and human disease

Nicholls, Thomas J., Rorbach, Joanna, Minczuk, Michal

Journal:

The International Journal of Biochemistry & Cell Biology

Year:

2013

Language:

english

File:

PDF, 295 KB

english, 2013

14

Potent Inhibition of NTPase/Helicase of the West Nile Virus by Ring-Expanded (“Fat”) Nucleoside Analogues

Zhang, Ning, Chen, Huan-Ming, Koch, Verena, Schmitz, Herbert, Minczuk, Michal, Stepien, Piotr, Fattom, Ali I., Naso, Robert B., Kalicharran, Kishna, Borowski, Peter, Hosmane, Ramachandra S.

Journal:

Journal of Medicinal Chemistry

Year:

2003

Language:

english

File:

PDF, 199 KB

english, 2003

15

In D-loop: 40years of mitochondrial 7S DNA

Nicholls, Thomas J., Minczuk, Michal

Journal:

Experimental Gerontology

Year:

2014

Language:

english

File:

PDF, 503 KB

english, 2014

16

RNA Degradation in Yeast and Human Mitochondria

Piwowarski, Jan, Dziembowski, Andrzej, Dmochowska, Aleksandra, Minczuk, Michal, Tomecki, Rafal, Gewartowski, Kamil, Stepien, Piotr P.

Journal:

Toxicology Mechanisms and Methods

Year:

2004

Language:

english

File:

PDF, 79 KB

english, 2004

17

Mitochondrially targeted ZFNs for selective degradation of pathogenic mitochondrial genomes bearing large-scale deletions or point mutations

Gammage, P. A., Rorbach, J., Vincent, A. I., Rebar, E. J., Minczuk, M.

Journal:

EMBO Molecular Medicine

Year:

2014

Language:

english

File:

PDF, 879 KB

english, 2014

18

TEFM (c17orf42) is necessary for transcription of human mtDNA

Minczuk, M., He, J., Duch, A. M., Ettema, T. J., Chlebowski, A., Dzionek, K., Nijtmans, L. G. J., Huynen, M. A., Holt, I. J.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 6.74 MB

english, 2011

19

Inhibition of herpes simplex virus 1 gene expression by designer zinc-finger transcription factors

Papworth, M., Moore, M., Isalan, M., Minczuk, M., Choo, Y., Klug, A.

Journal:

Proceedings of the National Academy of Sciences

Year:

2003

Language:

english

File:

PDF, 258 KB

english, 2003

20

Sequence-specific modification of mitochondrial DNA using a chimeric zinc finger methylase

Minczuk, M., Papworth, M. A., Kolasinska, P., Murphy, M. P., Klug, A.

Journal:

Proceedings of the National Academy of Sciences

Year:

2006

Language:

english

File:

PDF, 1.63 MB

english, 2006

21

MPV17L2 is required for ribosome assembly in mitochondria

Dalla Rosa, I., Durigon, R., Pearce, S. F., Rorbach, J., Hirst, E. M. A., Vidoni, S., Reyes, A., Brea-Calvo, G., Minczuk, M., Woellhaf, M. W., Herrmann, J. M., Huynen, M. A., Holt, I. J., Spinazzola,

Journal:

Nucleic Acids Research

Year:

2014

Language:

english

File:

PDF, 5.63 MB

english, 2014

22

Linear mtDNA fragments and unusual mtDNA rearrangements associated with pathological deficiency of MGME1 exonuclease

Nicholls, T. J., Zsurka, G., Peeva, V., Scholer, S., Szczesny, R. J., Cysewski, D., Reyes, A., Kornblum, C., Sciacco, M., Moggio, M., Dziembowski, A., Kunz, W. S., Minczuk, M.

Journal:

Human Molecular Genetics

Year:

2014

Language:

english

File:

PDF, 921 KB

english, 2014

23

MRM2 and MRM3 are involved in biogenesis of the large subunit of the mitochondrial ribosome

Rorbach, J., Boesch, P., Gammage, P. A., Nicholls, T. J. J., Pearce, S. F., Patel, D., Hauser, A., Perocchi, F., Minczuk, M.

Journal:

Molecular Biology of the Cell

Year:

2014

Language:

english

File:

PDF, 2.71 MB

english, 2014

24

PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria

Rorbach, J., Nicholls, T. J. J., Minczuk, M.

Journal:

Nucleic Acids Research

Year:

2011

Language:

english

File:

PDF, 3.41 MB

english, 2011

25

The Yeast Mitochondrial Degradosome: ITS COMPOSITION, INTERPLAY BETWEEN RNA HELICASE AND RNase ACTIVITIES AND THE ROLE IN MITOCHONDRIAL RNA METABOLISM

Dziembowski, A., Piwowarski, J., Hoser, R., Minczuk, M., Dmochowska, A., Siep, M., van der Spek, H., Grivell, L., Stepien, P. P.

Journal:

Journal of Biological Chemistry

Year:

2003

Language:

english

File:

PDF, 963 KB

english, 2003

26

Localisation of the human hSuv3p helicase in the mitochondrial matrix and its preferential unwinding of dsDNA

Journal:

Nucleic Acids Research

Year:

2002

Language:

english

File:

PDF, 332 KB

english, 2002

27

An Upstream Open Reading Frame and the Context of the Two AUG Codons Affect the Abundance of Mitochondrial and Nuclear RNase H1

Suzuki, Y., Holmes, J. B., Cerritelli, S. M., Sakhuja, K., Minczuk, M., Holt, I. J., Crouch, R. J.

Journal:

Molecular and Cellular Biology

Year:

2010

Language:

english

File:

PDF, 2.60 MB

english, 2010

28

Nuclear-encoded factors involved in post-transcriptional processing and modification of mitochondrial tRNAs in human disease

Powell, Christopher A., Nicholls, Thomas J., Minczuk, Michal

Journal:

Frontiers in Genetics

Year:

2015

Language:

english

File:

PDF, 1.51 MB

english, 2015

29

C7orf30 is necessary for biogenesis of the large subunit of the mitochondrial ribosome

Rorbach, J., Gammage, P. A., Minczuk, M.

Journal:

Nucleic Acids Research

Year:

2012

Language:

english

File:

PDF, 3.93 MB

english, 2012

30

C7orf30 is necessary for biogenesis of the large subunit of the mitochondrial ribosome: Figure 4.

Rorbach, Joanna, Gammage, Payam A., Minczuk, Michal

Journal:

Nucleic Acids Research

Year:

2015

Language:

english

File:

PDF, 515 KB

english, 2015

31

Chimeric DNA methyltransferases target DNA methylation to specific DNA sequences and repress expression of target genes

Li, F., Papworth, M., Minczuk, M., Rohde, C., Zhang, Y., Ragozin, S., Jeltsch, A.

Journal:

Nucleic Acids Research

Year:

2006

Language:

english

File:

PDF, 1.73 MB

english, 2006

32

Mitochondrial transcript maturation and its disorders

Van Haute, Lindsey, Pearce, Sarah F., Powell, Christopher A., D’Souza, Aaron R., Nicholls, Thomas J., Minczuk, Michal

Journal:

Journal of Inherited Metabolic Disease

Year:

2015

Language:

english

File:

PDF, 1.04 MB

english, 2015

33

Human Cytomegalovirus Infection Upregulates the Mitochondrial Transcription and Translation Machineries

Karniely, S., Weekes, M. P., Antrobus, R., Rorbach, J., van Haute, L., Umrania, Y., Smith, D. L., Stanton, R. J., Minczuk, M., Lehner, P. J., Sinclair, J. H.

Journal:

Year:

2016

Language:

english

File:

PDF, 1.41 MB

english, 2016

34

Human mitochondrial ribosomes can switch their structural RNA composition

Rorbach, Joanna, Gao, Fei, Powell, Christopher A., D’Souza, Aaron, Lightowlers, Robert N., Minczuk, Michal, Chrzanowska-Lightowlers, Zofia M.

Journal:

Proceedings of the National Academy of Sciences

Year:

2016

Language:

english

File:

PDF, 907 KB

english, 2016

35

Regulation of Mammalian Mitochondrial Gene Expression: Recent Advances

Pearce, Sarah F., Rebelo-Guiomar, Pedro, D’Souza, Aaron R., Powell, Christopher A., Van Haute, Lindsey, Minczuk, Michal

Journal:

Trends in Biochemical Sciences

Year:

2017

Language:

english

File:

PDF, 3.54 MB

english, 2017

36

Manipulating mtDNA heteroplasmy with designer zinc-finger nuclease technology

Journal:

Neuromuscular Disorders

Year:

2017

Language:

english

File:

PDF, 146 KB

english, 2017

37

Human mitochondrial ribosomes can switch structural tRNAs – but when and why?

Chrzanowska-Lightowlers, Zofia, Rorbach, Joanna, Minczuk, Michal

Journal:

Year:

2017

Language:

english

File:

PDF, 1.70 MB

english, 2017

38

Macropinocytic entry of isolated mitochondria in epidermal growth factor-activated human osteosarcoma cells

Patel, Dipali, Rorbach, Joanna, Downes, Kate, Szukszto, Maciej J., Pekalski, Marcin L., Minczuk, Michal

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 3.68 MB

english, 2017

39

Myosin VI-Dependent Actin Cages Encapsulate Parkin-Positive Damaged Mitochondria

Kruppa, Antonina J., Kishi-Itakura, Chieko, Masters, Thomas A., Rorbach, Joanna E., Grice, Guinevere L., Kendrick-Jones, John, Nathan, James A., Minczuk, Michal, Buss, Folma

Journal:

Developmental Cell

Year:

2018

Language:

english

File:

PDF, 7.51 MB

english, 2018

40

NADH Shuttling Couples Cytosolic Reductive Carboxylation of Glutamine with Glycolysis in Cells with Mitochondrial Dysfunction

Gaude, Edoardo, Schmidt, Christina, Gammage, Payam A., Dugourd, Aurelien, Blacker, Thomas, Chew, Sew Peak, Saez-Rodriguez, Julio, O’Neill, John S., Szabadkai, Gyorgy, Minczuk, Michal, Frezza, Christia

Journal:

Year:

2018

Language:

english

File:

PDF, 4.63 MB

english, 2018

41

Linear mitochondrial DNA is rapidly degraded by components of the replication machinery

Peeva, Viktoriya, Blei, Daniel, Trombly, Genevieve, Corsi, Sarah, Szukszto, Maciej J., Rebelo-Guiomar, Pedro, Gammage, Payam A., Kudin, Alexei P., Becker, Christian, Altmüller, Janine, Minczuk, Michal

Journal:

Nature Communications

Year:

2018

Language:

english

File:

PDF, 2.47 MB

english, 2018

42

Amino Acid Starvation Has Opposite Effects on Mitochondrial and Cytosolic Protein Synthesis

Johnson, Mark A., Vidoni, Sara, Durigon, Romina, Pearce, Sarah F., Rorbach, Joanna, He, Jiuya, Brea-Calvo, Gloria, Minczuk, Michal, Reyes, Aurelio, Holt, Ian J., Spinazzola, Antonella, Lightowlers, Ro

Journal:

Year:

2014

Language:

english

File:

PDF, 5.94 MB

english, 2014

43

Dealing with an Unconventional Genetic Code in Mitochondria: The Biogenesis and Pathogenic Defects of the 5‐Formylcytosine Modification in Mitochondrial tRNAMet

Van Haute, Lindsey, Powell, Christopher A., Minczuk, Michal

Journal:

Year:

2017

Language:

english

File:

PDF, 4.19 MB

english, 2017

44

Mitochondrial transcription and translation: overview

D’Souza, Aaron R., Minczuk, Michal

Journal:

Essays in Biochemistry

Year:

2018

Language:

english

File:

PDF, 869 KB

english, 2018

45

The mammalian mitochondrial epitranscriptome

Rebelo-Guiomar, Pedro, Powell, Christopher A., Van Haute, Lindsey, Minczuk, Michal

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms

Year:

2018

Language:

english

File:

PDF, 10.28 MB

english, 2018

46

Low-Dose Imaging in a New Preclinical Total-Body PET/CT Scanner

Molinos, Cesar, Sasser, Todd, Salmon, Phil, Gsell, Willy, Viertl, David, Massey, James C., Mińczuk, Krzysztof, Li, Jie, Kundu, Bijoy K., Berr, Stuart, Correcher, Carlos, Bahadur, Ali, Attarwala, Ali A

Journal:

Frontiers in Medicine

Year:

2019

Language:

english

File:

PDF, 5.88 MB

english, 2019

47

The structure of human EXD2 reveals a chimeric 3′ to 5′ exonuclease domain that discriminates substrates via metal coordination

Park, Jumi, Lee, Song-Yi, Jeong, Hanbin, Kang, Myeong-Gyun, Van Haute, Lindsey, Minczuk, Michal, Seo, Jeong Kon, Jun, Youngsoo, Myung, Kyungjae, Rhee, Hyun-Woo, Lee, Changwook

Journal:

Nucleic Acids Research

Year:

2019

Language:

english

File:

PDF, 8.09 MB

english, 2019

48

EXD2 Protects Stressed Replication Forks and Is Required for Cell Viability in the Absence of BRCA1/2

Nieminuszczy, Jadwiga, Broderick, Ronan, Bellani, Marina A., Smethurst, Elizabeth, Schwab, Rebekka A., Cherdyntseva, Veronica, Evmorfopoulou, Theodora, Lin, Yea-Lih, Minczuk, Michal, Pasero, Philippe,

Journal:

Year:

2019

Language:

english

File:

PDF, 3.82 MB

english, 2019

49

Energetic costs of cellular and therapeutic control of stochastic mitochondrial DNA populations

Hoitzing, Hanne, Gammage, Payam A., Haute, Lindsey van, Minczuk, Michal, Johnston, Iain G., Jones, Nick S., Beard, Daniel A

Journal:

PLoS Computational Biology

Year:

2019

Language:

english

File:

PDF, 4.33 MB

english, 2019

50

EXD2 Protects Stressed Replication Forks and Is Required for Cell Viability in the Absence of BRCA1/2

Nieminuszczy, Jadwiga, Broderick, Ronan, Bellani, Marina A., Smethurst, Elizabeth, Schwab, Rebekka A., Cherdyntseva, Veronica, Evmorfopoulou, Theodora, Lin, Yea-Lih, Minczuk, Michal, Pasero, Philippe,

Journal:

Year:

2019

File:

PDF, 3.82 MB

2019